EMBOSSwin | 5C6AFDFB7FB4B06F1C28B9D6013EF4AE1F34041D

EMBOSSwin

Name	EMBOSSwin	DOWNLOAD Copy Link Trouble downloading? see How To
Total Size	29.6 MB
Total Files	1341
Hash	5C6AFDFB7FB4B06F1C28B9D6013EF4AE1F34041D

/acd/
aaindexextract.acd	0.4 KB
abiview.acd	1.6 KB
acdc.acd	0.1 KB
acdlog.acd	0.1 KB
acdpretty.acd	0.1 KB
acdtable.acd	0.1 KB
acdtrace.acd	0.3 KB
acdvalid.acd	0.1 KB
ajbad.acd	1.4 KB
ajfeatest.acd	0.4 KB
ajtest.acd	0.9 KB
antigenic.acd	0.7 KB
a~	0.3 KB
backtranseq.acd	0.5 KB
banana.acd	1.0 KB
biosed.acd	0.9 KB
btwisted.acd	0.8 KB
cai.acd	0.5 KB
chaos.acd	0.5 KB
charge.acd	1.0 KB
checktrans.acd	1.5 KB
chips.acd	0.7 KB
cirdna.acd	4.0 KB
codcmp.acd	0.6 KB
coderet.acd	0.9 KB
codes.english	1.7 KB
complex.acd	2.1 KB
compseq.acd	4.8 KB
cons.acd	2.4 KB
corbatest.acd	0.5 KB
cpgplot.acd	3.3 KB
cpgreport.acd	1.0 KB
cusp.acd	0.5 KB
cutgextract.acd	0.5 KB
cutseq.acd	1.2 KB
dan.acd	5.0 KB
dbiblast.acd	3.0 KB
dbifasta.acd	2.8 KB
dbiflat.acd	2.7 KB
dbigcg.acd	2.8 KB
degapseq.acd	0.4 KB
demoalign.acd	1.5 KB
demofeatures.acd	0.7 KB
demolist.acd	0.4 KB
demoreport.acd	0.5 KB
demosequence.acd	0.2 KB
demostring.acd	0.3 KB
demotable.acd	0.4 KB
descseq.acd	1.2 KB
diffseq.acd	2.9 KB
digest.acd	2.1 KB
distmat.acd	3.3 KB
dotmatcher.acd	1.8 KB
dotpath.acd	1.3 KB
dottup.acd	1.2 KB
dreg.acd	0.6 KB
einverted.acd	1.4 KB
embossdata.acd	1.9 KB
embossversion.acd	0.5 KB
emma.acd	15.9 KB
emowse.acd	2.0 KB
entrails.acd	0.6 KB
entret.acd	0.7 KB
epestfind.acd	3.1 KB
eprimer3.acd	34.3 KB
equicktandem.acd	1.0 KB
est2genome.acd	4.2 KB
etandem.acd	1.6 KB
extractfeat.acd	9.9 KB
extractseq.acd	1.7 KB
findkm.acd	0.8 KB
freak.acd	1.2 KB
fuzznuc.acd	2.4 KB
fuzzpro.acd	2.2 KB
fuzztran.acd	3.7 KB
garnier.acd	1.3 KB
geecee.acd	0.5 KB
getorf.acd	4.5 KB
giep.acd	1.1 KB
groups.standard	2.3 KB
helixturnhelix.acd	1.2 KB
histogramtest.acd	1.0 KB
hmoment.acd	1.3 KB
iep.acd	1.2 KB
infoalign.acd	4.6 KB
infoseq.acd	2.1 KB
intconv.acd	0.5 KB
isochore.acd	1.0 KB
kmrsplitter.acd	1.5 KB
kmrunion.acd	1.0 KB
knowntypes.standard	12.0 KB
lindna.acd	4.0 KB
listor.acd	1.7 KB
Makefile	16.0 KB
Makefile.am	2.9 KB
Makefile.am~	3.1 KB
Makefile.in	15.6 KB
marscan.acd	0.9 KB
maskfeat.acd	2.5 KB
maskseq.acd	2.3 KB
matcher.acd	3.1 KB
megamerger.acd	1.7 KB
merger.acd	1.4 KB
msbar.acd	3.6 KB
mwcontam.acd	0.8 KB
mwfilter.acd	1.1 KB
needle.acd	2.8 KB
newcoils.acd	1.5 KB
newcpgreport.acd	1.3 KB
newcpgseek.acd	0.7 KB
newseq.acd	1.7 KB
noreturn.acd	0.8 KB
notseq.acd	1.7 KB
nthseq.acd	0.7 KB
octanol.acd	1.3 KB
oddcomp.acd	1.9 KB
palindrome.acd	1.5 KB
pasteseq.acd	1.0 KB
patmatdb.acd	1.2 KB
patmatmotifs.acd	1.2 KB
patmattest.acd	0.6 KB
pepcoil.acd	1.0 KB
pepinfo.acd	1.4 KB
pepnet.acd	1.5 KB
pepstats.acd	0.8 KB
pepwheel.acd	2.3 KB
pepwindow.acd	1.0 KB
pepwindowall.acd	1.0 KB
plotcon.acd	1.3 KB
plotorf.acd	0.8 KB
polydot.acd	1.4 KB
preg.acd	0.6 KB
prettyplot.acd	5.8 KB
prettyseq.acd	1.4 KB
prima.acd	3.8 KB
primers.acd	3.2 KB
primersearch.acd	0.8 KB
printsextract.acd	0.4 KB
profit.acd	0.6 KB
prophecy.acd	2.0 KB
prophet.acd	1.0 KB
prosextract.acd	0.4 KB
pscan.acd	0.9 KB
psiphi.acd	1.3 KB
rebaseextract.acd	0.8 KB
recoder.acd	1.1 KB
redata.acd	1.2 KB
remap.acd	11.4 KB
restover.acd	2.4 KB
restrict.acd	6.6 KB
revseq.acd	0.9 KB
sections.standard	1.5 KB
seealso.acd	6.1 KB
seqinfo.acd	0.5 KB
seqmatchall.acd	0.7 KB
seqret.acd	0.7 KB
seqretall.acd	0.5 KB
seqretallfeat.acd	0.5 KB
seqretset.acd	0.6 KB
seqretsingle.acd	0.6 KB
seqretsplit.acd	0.8 KB
seqrettype.acd	1.7 KB
showalign.acd	7.7 KB
showdb.acd	2.5 KB
showfeat.acd	11.0 KB
showorf.acd	1.4 KB
showseq.acd	18.9 KB
shuffleseq.acd	0.7 KB
sigcleave.acd	1.2 KB
silent.acd	1.2 KB
sirna.acd	4.3 KB
sixpack.acd	5.4 KB
skipseq.acd	0.7 KB
splitter.acd	1.0 KB
stretcher.acd	1.6 KB
stssearch.acd	0.6 KB
supermatcher.acd	2.2 KB
syco.acd	1.2 KB
tcode.acd	2.3 KB
testplot.acd	0.6 KB
textsearch.acd	2.2 KB
tfextract.acd	0.4 KB
tfm.acd	1.3 KB
tfscan.acd	1.5 KB
tmap.acd	0.6 KB
tranalign.acd	1.6 KB
transeq.acd	3.9 KB
treetypedisplay.acd	0.2 KB
trimest.acd	3.4 KB
trimseq.acd	2.2 KB
twofeat.acd	14.7 KB
union.acd	0.4 KB
variables.standard	1.3 KB
vectorstrip.acd	1.6 KB
water.acd	2.7 KB
whichdb.acd	0.7 KB
wobble.acd	1.0 KB
wordcount.acd	0.7 KB
wordmatch.acd	1.1 KB
wossname.acd	6.9 KB
yank.acd	0.6 KB
/data/AAINDEX/
dummyfile	0.1 KB
Makefile	9.3 KB
Makefile.am	0.1 KB
Makefile.in	9.0 KB
/data/CODONS/
Eacc.cut	2.2 KB
Eadenovirus5.cut	2.1 KB
Eadenovirus7.cut	2.1 KB
Eaidlav.cut	2.1 KB
Eanasp.cut	2.2 KB
Eani.cut	2.2 KB
Eani_h.cut	2.2 KB
Eanidmit.cut	2.1 KB
Easn.cut	2.2 KB
Eath.cut	2.2 KB
Eatu.cut	2.2 KB
Eavi.cut	2.2 KB
Ebja.cut	2.2 KB
Ebly.cut	2.2 KB
Ebme.cut	2.2 KB
Ebmo.cut	2.2 KB
Ebna.cut	2.2 KB
Ebov.cut	2.2 KB
Ebovsp.cut	2.2 KB
Ebst.cut	2.2 KB
Ebsu.cut	2.2 KB
Ebsu_h.cut	2.2 KB
Ecac.cut	2.2 KB
Ecal.cut	2.2 KB
Eccr.cut	2.1 KB
Ecel.cut	2.2 KB
Echi.cut	2.1 KB
Echicken.cut	2.1 KB
Echisp.cut	2.2 KB
Echk.cut	2.2 KB
Echmp.cut	2.2 KB
Echnt.cut	2.2 KB
Echos.cut	2.2 KB
Echzm.cut	2.2 KB
Echzmrubp.cut	2.1 KB
Ecpx.cut	2.1 KB
Ecre.cut	2.1 KB
Ecrisp.cut	2.2 KB
Ectr.cut	2.2 KB
Edayhoff.cut	2.1 KB
Eddi.cut	2.2 KB
Eddi_h.cut	2.1 KB
Edog.cut	2.2 KB
Edro.cut	2.3 KB
Edro_h.cut	2.2 KB
Edrosophila.cut	2.1 KB
Eeca.cut	2.2 KB
Eeco.cut	2.3 KB
Eeco_h.cut	2.2 KB
Eecoli.cut	2.1 KB
Ef1.cut	2.1 KB
Efish.cut	2.1 KB
Efmdvpolyp.cut	2.1 KB
Eham.cut	2.2 KB
Ehha.cut	2.2 KB
Ehin.cut	2.2 KB
Ehma.cut	2.1 KB
Ehum.cut	2.3 KB
Ehuman.cut	2.2 KB
Ekla.cut	2.2 KB
Ekpn.cut	2.2 KB
Ella.cut	2.2 KB
Emac.cut	2.1 KB
Emaize.cut	2.1 KB
Emam_h.cut	2.2 KB
Emixlg.cut	2.1 KB
Emouse.cut	2.1 KB
Emsa.cut	2.2 KB
Emse.cut	2.2 KB
Emta.cut	2.2 KB
Emtu.cut	2.2 KB
Emus.cut	2.2 KB
Emussp.cut	2.3 KB
Emva.cut	2.1 KB
Emze.cut	2.2 KB
Emzecp.cut	2.1 KB
Encr.cut	2.2 KB
Eneu.cut	2.2 KB
Engo.cut	2.1 KB
Eoncsp.cut	2.2 KB
Epae.cut	2.2 KB
Epea.cut	2.2 KB
Epet.cut	2.1 KB
Epfa.cut	2.2 KB
Ephix174.cut	2.1 KB
Ephv.cut	2.2 KB
Ephy.cut	2.2 KB
Epig.cut	2.2 KB
Epolyomaa2.cut	2.1 KB
Epombe.cut	2.1 KB
Epombecai.cut	2.1 KB
Epot.cut	2.2 KB
Eppu.cut	2.2 KB
Epse.cut	2.2 KB
Epsy.cut	2.2 KB
Epvu.cut	2.1 KB
Erab.cut	2.2 KB
Erabbit.cut	2.1 KB
Erabsp.cut	2.2 KB
Erat.cut	2.2 KB
Eratsp.cut	2.3 KB
Erca.cut	2.2 KB
Erhm.cut	2.1 KB
Eric.cut	2.2 KB
Erle.cut	2.2 KB
Erme.cut	2.2 KB
Ersp.cut	2.1 KB
Esalsp.cut	2.2 KB
Esau.cut	2.2 KB
Esco.cut	2.2 KB
Esgi.cut	2.1 KB
Eshp.cut	2.1 KB
Eshpsp.cut	2.2 KB
Esli.cut	2.1 KB
Eslm.cut	2.1 KB
Esma.cut	2.2 KB
Esmi.cut	2.2 KB
Esmu.cut	2.2 KB
Esoy.cut	2.2 KB
Espi.cut	2.2 KB
Espn.cut	2.2 KB
Espo.cut	2.2 KB
Espo_h.cut	2.1 KB
Espu.cut	2.2 KB
Esta.cut	2.1 KB
Esty.cut	2.2 KB
Esus.cut	2.2 KB
Esv40.cut	2.1 KB
Esyhsp.cut	2.2 KB
Esynsp.cut	2.2 KB
Etbr.cut	2.2 KB
Etcr.cut	2.2 KB
Eter.cut	2.1 KB
Etetsp.cut	2.1 KB
Etob.cut	2.2 KB
Etobcp.cut	2.1 KB
Etom.cut	2.2 KB
Etrb.cut	2.2 KB
Evco.cut	2.2 KB
Ewht.cut	2.2 KB
Exel.cut	2.2 KB
Exenopus.cut	2.1 KB
Eyeast.cut	2.1 KB
Eyeastcai.cut	2.1 KB
Eyen.cut	2.2 KB
Eysc.cut	2.3 KB
Eysc_h.cut	2.2 KB
Eyscmt.cut	2.1 KB
Eysp.cut	2.2 KB
Ezebrafish.cut	2.2 KB
Ezma.cut	2.2 KB
Makefile	13.5 KB
Makefile.am	2.1 KB
Makefile.in	13.1 KB
/data/PRINTS/
dummyfile	0.1 KB
Makefile	11.5 KB
Makefile.am	0.1 KB
Makefile.in	11.1 KB
/data/PROSITE/
dummyfile	0.1 KB
Makefile	11.5 KB
Makefile.am	0.1 KB
Makefile.in	11.1 KB
/data/REBASE/
dummyfile	0.1 KB
Makefile	11.5 KB
Makefile.am	0.1 KB
Makefile.in	11.1 KB
/data/
Eaa_acc_surface.dat	0.5 KB
Eaa_hydropathy.dat	0.7 KB
Eaa_properties.dat	0.6 KB
Eamino.dat	1.4 KB
Eangles.dat	0.2 KB
Eangles_tri.dat	1.1 KB
Eantigenic.dat	3.5 KB
Ebases.iub	0.2 KB
EBLOSUM30	2.2 KB
EBLOSUM35	2.2 KB
EBLOSUM40	2.2 KB
EBLOSUM45	2.2 KB
EBLOSUM50	2.2 KB
EBLOSUM55	2.2 KB
EBLOSUM60	2.2 KB
EBLOSUM62	2.2 KB
EBLOSUM62-12	2.2 KB
EBLOSUM65	2.2 KB
EBLOSUM70	2.2 KB
EBLOSUM75	2.2 KB
EBLOSUM80	2.2 KB
EBLOSUM85	2.2 KB
EBLOSUM90	2.2 KB
EBLOSUMN	2.2 KB
Ecolour.map	6.5 KB
Edayhoff.freq	0.3 KB
Edna.melt	0.7 KB
EDNAFULL	1.3 KB
EDNAMAT	1.3 KB
Eembl.ior	0.4 KB
Eenergy.dat	0.2 KB
Efeatures.embl	25.5 KB
Efeatures.emboss	26.1 KB
Efeatures.gff	25.8 KB
Efeatures.pir	1.0 KB
Efeatures.protein	7.6 KB
Efeatures.swiss	7.3 KB
Efreqs.dat	1.1 MB
EGC.0	0.7 KB
EGC.1	1.0 KB
EGC.10	0.7 KB
EGC.11	1.9 KB
EGC.12	1.2 KB
EGC.13	1.6 KB
EGC.14	1.4 KB
EGC.15	0.7 KB
EGC.16	0.7 KB
EGC.2	1.1 KB
EGC.21	1.5 KB
EGC.22	1.6 KB
EGC.23	0.9 KB
EGC.3	1.6 KB
EGC.4	1.9 KB
EGC.5	2.2 KB
EGC.6	1.4 KB
EGC.9	0.9 KB
Ehet.dat	343.5 KB
Ehth.dat	2.0 KB
Ehth87.dat	1.8 KB
Emass.dat	0.6 KB
Emassmod.dat	1.2 KB
embossre.equ	2.8 KB
Ememe.dat	7.4 KB
Emwfilter.dat	0.9 KB
Enakai.dat	1.4 KB
ENUC.4.2	0.5 KB
ENUC.4.4	1.2 KB
EPAM10	2.7 KB
EPAM100	2.1 KB
EPAM110	2.1 KB
EPAM120	2.1 KB
EPAM130	2.1 KB
EPAM140	2.1 KB
EPAM150	2.1 KB
EPAM160	2.1 KB
EPAM170	2.7 KB
EPAM180	2.7 KB
EPAM190	2.1 KB
EPAM20	2.7 KB
EPAM200	2.1 KB
EPAM210	2.1 KB
EPAM220	2.1 KB
EPAM230	2.1 KB
EPAM240	2.1 KB
EPAM250	2.1 KB
EPAM260	2.1 KB
EPAM270	2.7 KB
EPAM280	2.1 KB
EPAM290	2.1 KB
EPAM30	2.7 KB
EPAM300	2.1 KB
EPAM310	2.1 KB
EPAM320	2.1 KB
EPAM330	2.1 KB
EPAM340	2.1 KB
EPAM350	2.7 KB
EPAM360	2.1 KB
EPAM370	2.1 KB
EPAM380	2.1 KB
EPAM390	2.1 KB
EPAM40	2.7 KB
EPAM400	2.1 KB
EPAM410	2.7 KB
EPAM420	2.7 KB
EPAM430	2.1 KB
EPAM440	2.1 KB
EPAM450	2.1 KB
EPAM460	2.1 KB
EPAM470	2.7 KB
EPAM480	2.7 KB
EPAM490	2.1 KB
EPAM50	2.7 KB
EPAM500	2.1 KB
EPAM60	2.7 KB
EPAM70	2.7 KB
EPAM80	2.7 KB
EPAM90	2.7 KB
Epdbtosp.dat	1.2 MB
Epepcoil.dat	1.5 KB
Epk.dat	0.2 KB
Epprofile	2.1 KB
Eprior1.plib	0.4 KB
Eprior30.plib	10.3 KB
Erna.melt	0.7 KB
Esig.euk	1.8 KB
Esig.pro	1.8 KB
Etags.embl	5.6 KB
Etags.emboss	5.9 KB
Etags.gff	6.3 KB
Etags.pir	0.0 KB
Etags.protein	0.0 KB
Etags.swiss	0.0 KB
Etcode.dat	0.9 KB
Evdw.dat	9.7 KB
Ewhite-wimley.dat	0.6 KB
Makefile	18.8 KB
Makefile.am	1.9 KB
Makefile.in	18.4 KB
SSSUB	0.1 KB
/doc/html/
aaindexextract.html	14.6 KB
abiview.1.abiview.gif	558.9 KB
abiview.html	11.1 KB
acd_group.html	1.2 KB
acdc.html	4.5 KB
acdlog.html	0.3 KB
acdpretty.html	4.2 KB
acdtable.html	5.2 KB
acdtrace.html	4.6 KB
acdvalid.html	4.3 KB
ajtest.html	4.9 KB
alignment_consensus_group.html	1.1 KB
alignment_differences_group.html	0.8 KB
alignment_dot_plots_group.html	1.2 KB
alignment_global_group.html	2.9 KB
alignment_local_group.html	1.3 KB
alignment_multiple_group.html	1.6 KB
alignrunner.html	11.0 KB
allversusall.html	19.6 KB
antigenic.html	20.5 KB
backtranseq.html	24.2 KB
banana.html	82.4 KB
biosed.html	17.5 KB
btwisted.html	16.1 KB
cai.html	11.1 KB
cathparse.html	28.1 KB
chaos.1.chaos.gif	6.9 KB
chaos.html	13.9 KB
charge.html	16.1 KB
checktrans.html	13.1 KB
chips.html	14.5 KB
cirdna.1.cirdna.gif	11.3 KB
cirdna.html	16.9 KB
clique.html	9.7 KB
codcmp.html	9.8 KB
coderet.html	17.1 KB
compseq.html	34.4 KB
cons.html	13.3 KB
consense.html	10.5 KB
contactalign.html	15.4 KB
contactcount.html	10.9 KB
contacts.html	37.9 KB
contml.html	13.2 KB
contrast.html	9.0 KB
cpgplot.1.cpgplot.gif	16.5 KB
cpgplot.html	20.2 KB
cpgreport.html	16.0 KB
crystalball.html	14.8 KB
cusp.html	15.0 KB
cutgextract.html	6.4 KB
cutseq.html	21.2 KB
dan.2.dan.gif	30.6 KB
dan.html	30.8 KB
dbiblast.html	12.2 KB
dbifasta.html	10.5 KB
dbiflat.html	10.9 KB
dbigcg.html	10.7 KB
degapseq.html	10.9 KB
degapseqrunner.html	9.9 KB
descseq.html	11.8 KB
diffseq.html	53.7 KB
digest.html	18.9 KB
display_group.html	2.5 KB
distmat.html	22.4 KB
dnacomp.html	11.6 KB
dnadist.html	22.7 KB
dnainvar.html	17.9 KB
dnaml.html	29.1 KB
dnamlk.html	28.0 KB
dnapars.html	9.4 KB
dnapenny.html	30.9 KB
dollop.html	13.9 KB
dolpenny.html	26.6 KB
domainalign.html	41.5 KB
domainer.html	89.6 KB
domainnr.html	35.9 KB
domainrep.html	10.3 KB
domainreso.html	21.8 KB
domainseqs.html	26.1 KB
domainsse.html	25.3 KB
dotmatcher.1.dotmatcher.gif	8.1 KB
dotmatcher.html	21.6 KB
dotpath.1.dotpath.gif	10.4 KB
dotpath.html	22.3 KB
dottup.1.dottup.gif	9.1 KB
dottup.html	19.6 KB
dreg.html	43.8 KB
ealistat.html	13.4 KB
eclique.html	5.5 KB
econsense.html	7.1 KB
econtml.html	7.6 KB
econtrast.html	4.9 KB
edit_group.html	3.8 KB
ednacomp.html	5.8 KB
ednadist.html	6.0 KB
ednainvar.html	6.3 KB
ednaml.html	10.5 KB
ednamlk.html	9.9 KB
ednapars.html	6.2 KB
ednapenny.html	10.8 KB
edollop.html	6.6 KB
edolpenny.html	7.6 KB
efactor.html	4.0 KB
efitch.html	7.8 KB
egendist.html	5.4 KB
ehmmalign.html	30.0 KB
ehmmbuild.html	42.4 KB
ehmmcalibrate.html	24.1 KB
ehmmconvert.html	58.0 KB
ehmmemit.html	21.4 KB
ehmmfetch.html	30.9 KB
ehmmindex.html	19.4 KB
ehmmpfam.html	32.3 KB
ehmmsearch.html	26.2 KB
einverted.html	22.0 KB
ekitsch.html	7.2 KB
emboss_icon.gif	1.4 KB
emboss_icon.jpg	9.6 KB
embossdata.html	23.6 KB
embossversion.html	5.4 KB
emix.html	8.1 KB
emma.html	72.5 KB
emnu.html	29.3 KB
emowse.html	38.7 KB
eneighbor.html	6.8 KB
entret.html	15.9 KB
enzyme_kinetics_group.html	0.8 KB
epenny.html	7.9 KB
epestfind.html	26.7 KB
eprimer3.html	79.2 KB
eprotdist.html	6.4 KB
eprotpars.html	7.7 KB
equicktandem.html	12.9 KB
erestml.html	7.6 KB
eseqboot.html	6.7 KB
esim4.html	35.2 KB
est2genome.html	38.6 KB
etandem.html	14.1 KB
extractfeat.html	54.1 KB
extractseq.html	23.7 KB
factor.html	12.8 KB
fclique.html	15.6 KB
fconsense.html	18.7 KB
fcontml.html	30.2 KB
fcontrast.html	23.4 KB
fdiscboot.html	21.5 KB
fdnacomp.html	24.4 KB
fdnadist.html	30.5 KB
fdnainvar.html	25.3 KB
fdnaml.html	40.9 KB
fdnamlk.html	35.4 KB
fdnamove.html	17.1 KB
fdnapars.html	25.4 KB
fdnapenny.html	32.0 KB
fdollop.html	25.1 KB
fdolmove.html	20.0 KB
fdolpenny.html	34.1 KB
fdrawgram.html	16.7 KB
fdrawtree.html	17.7 KB
feature_tables_group.html	1.3 KB
ffactor.html	17.6 KB
ffitch.html	20.0 KB
ffreqboot.html	29.6 KB
fgendist.html	23.8 KB
findkm.1.findkm.gif	10.2 KB
findkm.html	7.2 KB
fitch.html	8.2 KB
fkitsch.html	25.4 KB
fmix.html	26.8 KB
fmove.html	15.4 KB
fneighbor.html	19.8 KB
fpars.html	25.4 KB
fpenny.html	33.5 KB
fproml.html	33.6 KB
fpromlk.html	35.2 KB
fprotdist.html	30.5 KB
fprotpars.html	29.4 KB
freak.html	14.8 KB
frestboot.html	29.6 KB
frestdist.html	23.9 KB
frestml.html	20.1 KB
fretree.html	17.4 KB
fseqboot.html	28.6 KB
fseqbootall.html	25.6 KB
ftreedist.html	22.8 KB
ftreedistpair.html	18.0 KB
fuzznuc.html	17.8 KB
fuzzpro.html	16.8 KB
fuzztran.html	27.6 KB
garnier.html	19.0 KB
geecee.html	10.0 KB
gendist.html	13.6 KB
getorf.html	24.8 KB
groups.html	5.9 KB
helixturnhelix.html	19.0 KB
hetparse.html	21.8 KB
hmm_group.html	1.9 KB
hmoment.html	16.2 KB
iep.html	16.0 KB
index.html	18.5 KB
infoalign.html	40.5 KB
information_group.html	1.7 KB
infoseq.html	19.1 KB
interface.html	44.1 KB
isochore.1.isochore.gif	33.5 KB
isochore.html	15.9 KB
jembossctl.html	7.8 KB
kitsch.html	12.8 KB
libgen.html	52.3 KB
libscan.html	35.7 KB
lindna.1.lindna.gif	3.1 KB
lindna.html	16.8 KB
listor.html	15.7 KB
Makefile	20.1 KB
Makefile.am	6.9 KB
Makefile.am~	0.3 KB
Makefile.in	19.7 KB
marscan.html	20.1 KB
maskfeat.html	26.7 KB
maskseq.html	16.4 KB
matcher.html	29.6 KB
megamerger.html	33.1 KB
meme.html	17.7 KB
menus_group.html	0.8 KB
merger.html	30.6 KB
mix.html	14.6 KB
msbar.html	26.9 KB
mse.html	8.6 KB
mwcontam.html	8.0 KB
mwfilter.html	9.0 KB
myseq.html	8.0 KB
nawalign.html	14.9 KB
nawalignrunner.html	10.4 KB
needle.html	28.6 KB
needlerunner.html	10.4 KB
neighbor.html	8.0 KB
newcpgreport.html	15.0 KB
newcpgseek.html	13.5 KB
newseq.html	11.2 KB
noreturn.html	9.0 KB
notseq.html	19.0 KB
nthseq.html	13.0 KB
nucleic_2d_structure_group.html	0.8 KB
nucleic_codon_usage_group.html	1.2 KB
nucleic_codon_usage_nucleic_gene_finding_group.html	0.8 KB
nucleic_composition_group.html	1.7 KB
nucleic_cpg_islands_group.html	1.2 KB
nucleic_gene_finding_group.html	1.6 KB
nucleic_motifs_group.html	1.1 KB
nucleic_mutation_group.html	0.9 KB
nucleic_primers_group.html	1.1 KB
nucleic_profiles_group.html	1.1 KB
nucleic_repeats_group.html	1.1 KB
nucleic_restriction_group.html	1.6 KB
nucleic_transcription_group.html	0.8 KB
nucleic_translation_group.html	1.8 KB
octanol.1.octanol.gif	12.9 KB
octanol.html	17.2 KB
oddcomp.html	12.5 KB
palindrome.html	16.6 KB
pasteseq.html	16.2 KB
patmatdb.html	13.2 KB
patmatmotifs.html	22.8 KB
pdbparse.html	112.2 KB
pdbplus.html	66.5 KB
pdbtosp.html	21.8 KB
penny.html	25.4 KB
pepcoil.html	14.1 KB
pepinfo.1.pepinfo.gif	62.3 KB
pepinfo.html	21.1 KB
pepnet.1.pepnet.gif	5.8 KB
pepnet.html	14.8 KB
pepstats.html	16.4 KB
pepwheel.1.pepwheel.gif	15.0 KB
pepwheel.html	16.7 KB
pepwindow.1.pepwindow.gif	14.9 KB
pepwindow.html	16.5 KB
pepwindowall.1.pepwindowall.gif	16.3 KB
pepwindowall.html	13.2 KB
pestfind.html	30.6 KB
phylogeny_consensus_group.html	1.2 KB
phylogeny_continuous_characters_group.html	1.1 KB
phylogeny_discrete_characters_group.html	2.5 KB
phylogeny_distance_matrix_group.html	1.7 KB
phylogeny_gene_frequencies_group.html	1.1 KB
phylogeny_group.html	0.8 KB
phylogeny_molecular_sequence_group.html	4.9 KB
phylogeny_tree_drawing_group.html	1.1 KB
plotcon.1.plotcon.gif	16.6 KB
plotcon.html	13.1 KB
plotorf.1.plotorf.gif	10.8 KB
plotorf.2.plotorf.gif	49.3 KB
plotorf.html	23.3 KB
polydot.1.polydot.gif	16.0 KB
polydot.html	10.4 KB
preg.html	39.7 KB
prettyplot.1.prettyplot.gif	50.1 KB
prettyplot.2.prettyplot.gif	51.2 KB
prettyplot.html	20.8 KB
prettyseq.html	22.5 KB
primersearch.html	13.2 KB
printsextract.html	14.2 KB
profit.html	10.7 KB
prophecy.html	36.4 KB
prophet.html	25.4 KB
prosextract.html	5.9 KB
protdist.html	16.2 KB
protein_2d_structure_group.html	1.6 KB
protein_3d_structure_group.html	4.5 KB
protein_composition_group.html	2.3 KB
protein_motifs_group.html	2.3 KB
protein_mutation_group.html	0.9 KB
protein_profiles_group.html	1.0 KB
protein_sequence_alignment_group.html	0.8 KB
pscan.html	19.2 KB
psiphi.html	27.6 KB
rebaseextract.html	15.4 KB
recoder.html	17.3 KB
redata.html	12.5 KB
remap.html	53.1 KB
restml.html	22.7 KB
restover.html	17.3 KB
restrict.html	39.6 KB
revseq.html	15.5 KB
rocon.html	49.8 KB
rocplot.html	77.6 KB
scope.html	13.5 KB
scopparse.html	30.9 KB
scorer.html	11.3 KB
scorerrunner.html	8.7 KB
seealso.html	19.0 KB
seqalign.html	321.7 KB
seqboot.html	15.5 KB
seqfraggle.html	52.4 KB
seqmatchall.html	10.0 KB
seqnr.html	44.7 KB
seqret.html	53.8 KB
seqretsplit.html	14.5 KB
seqsearch.html	36.8 KB
seqsort.html	32.5 KB
seqwords.html	20.2 KB
showalign.html	59.4 KB
showdb.html	30.3 KB
showfeat.html	36.8 KB
showorf.html	20.6 KB
showseq.html	74.8 KB
shuffleseq.html	9.7 KB
sigcleave.html	20.7 KB
siggen.html	49.6 KB
sigscan.html	23.8 KB
silent.html	14.3 KB
sirna.html	48.4 KB
sites.html	29.0 KB
sixpack.html	38.5 KB
skipseq.html	23.7 KB
splitter.html	30.1 KB
ssematch.html	32.0 KB
stretcher.html	23.7 KB
stssearch.html	8.3 KB
substitute.html	10.6 KB
substituterunner.html	8.4 KB
supermatcher.html	24.6 KB
syco.1.syco.gif	19.8 KB
syco.html	15.3 KB
tcode.html	27.4 KB
template.html	1.7 KB
test_group.html	1.0 KB
textsearch.html	13.7 KB
tfextract.html	13.3 KB
tfm.html	76.7 KB
tfscan.html	17.2 KB
tmap.1.tmap.gif	19.2 KB
tmap.html	16.1 KB
topo.gif	20.8 KB
topo.html	24.3 KB
tranalign.html	18.9 KB
transeq.html	55.5 KB
trimest.html	19.6 KB
trimseq.html	18.0 KB
twofeat.html	38.4 KB
union.html	10.3 KB
utils_database_creation_group.html	4.2 KB
utils_database_indexing_group.html	1.1 KB
utils_misc_group.html	0.9 KB
vectorstrip.html	17.0 KB
water.html	29.4 KB
whichdb.html	8.8 KB
wobble.1.wobble.gif	17.0 KB
wobble.html	14.0 KB
wordcount.html	11.3 KB
wordmatch.html	22.1 KB
wossname.html	77.2 KB
yank.html	16.3 KB
/test/data/structure/
1cs4.ccf	110.1 KB
1cs4.ent	45.0 KB
1ii7.ccf	93.2 KB
1ii7.ent	35.6 KB
54894.daf	1.1 KB
54894.dhf	13.9 KB
54894.sig	1.5 KB
55074.daf	2.7 KB
55074.dhf	45.9 KB
all.scop	0.9 KB
all.scop2	1.9 KB
all_e.scop	1.3 KB
all_s.scop	1.1 KB
CAT.names.all.small	0.2 KB
caths.list.small	0.1 KB
d1cs4a_.ccf	341.5 KB
d1ii7a_.ccf	81.9 KB
domlist.small	0.2 KB
Epdbtosp.dat	1.2 MB
het.txt	15.2 KB
pdb1cs4.ent	45.0 KB
pdb1ii7.ent	35.6 KB
pdbtosp.txt	2.7 KB
rocon.hits	1.6 KB
rocon.valid	7.9 KB
scop.all	0.0 KB
scop.cla.raw	0.4 KB
scop.des.raw	0.8 KB
seqwords.seq	28.5 KB
seqwords.terms	0.3 KB
sse.in	0.1 KB
swsmall	22.4 KB
swsmall.fasta	52.3 KB
swsmall.phr	9.9 KB
swsmall.pin	1.2 KB
swsmall.psq	20.3 KB
/test/data/
1atn.pxyz	1.2 MB
aaindex1.test	13.7 KB
abc.dat	0.1 KB
abiview.abi	152.5 KB
aligna.dna	0.1 KB
aligna.prot	0.1 KB
alignapart.dna	0.1 KB
alignapart.prot	0.1 KB
alignb.dna	0.0 KB
alignb.prot	0.1 KB
bad.list	0.1 KB
bluescript.seq	0.3 KB
cchu.pir	2.3 KB
cds.list	0.1 KB
cutg.codon	18.9 KB
data.cirp	0.4 KB
data.linp	0.4 KB
data.vectorstrip	0.2 KB
dna.acedb	0.1 KB
dna.aln	0.0 KB
dna.asn1	1.0 KB
dna.clustal	0.8 KB
dna.codata	0.4 KB
dna.embl	0.5 KB
dna.fasta	0.1 KB
dna.fitch	0.6 KB
dna.gcg	0.2 KB
dna.gcg8	0.2 KB
dna.genbank	0.3 KB
dna.ig	0.1 KB
dna.m-acedb	0.4 KB
dna.m-codata	1.4 KB
dna.m-embl	1.0 KB
dna.m-fasta	0.5 KB
dna.m-fasta-long	2.2 KB
dna.m-ncbi	0.6 KB
dna.m-strider	0.7 KB
dna.msf	0.8 KB
dna.msf8	1.1 KB
dna.ncbi	0.1 KB
dna.nonewline	0.1 KB
dna.phylip	0.5 KB
dna.phylip3	0.5 KB
dna.staden	0.1 KB
dna.strider	0.2 KB
dna.text	0.1 KB
dnagap.fasta	0.1 KB
emnu.in	0.0 KB
emrod	3.4 KB
emrod.nhr	0.3 KB
emrod.nin	0.1 KB
emrod.nsq	0.8 KB
enztest.dat	0.1 KB
exu2_drops.embl	2.6 KB
feat.emft	33.9 KB
feat.fasta	34.2 KB
feat.gbft	33.9 KB
feat.pir	1.4 KB
featprot.fasta	0.4 KB
file1	0.1 KB
file2	0.1 KB
globins.aln	2.1 KB
globins.fasta	1.3 KB
globins.gribskov	24.9 KB
globins.msf	2.2 KB
globins.prophecy	14.0 KB
good.list	0.1 KB
hba.fa	0.2 KB
hba.gff	20.5 KB
lac.primers	0.3 KB
litmus.seq	0.3 KB
Makefile	12.5 KB
Makefile.am	1.1 KB
Makefile.in	12.1 KB
mito.seq	16.9 KB
molwts.dat	0.2 KB
mw1.dat	0.0 KB
mw2.dat	0.0 KB
mw3.dat	0.1 KB
noid.fa	0.0 KB
oddcomp.comp	0.3 KB
outfile.prophecy	1.9 KB
paamir.gff	2.1 KB
paamir.pep	0.8 KB
pax.align	9.7 KB
pax6_cdna.fasta	1.8 KB
prev.comp	2.8 KB
primers	0.3 KB
prints.test	488.2 KB
prophecy.gribskov	24.9 KB
prosite.dat	172.9 KB
prosite.doc	17.5 KB
prot.acedb	0.1 KB
prot.codata	0.4 KB
prot.fasta	0.2 KB
prot.gcg	0.3 KB
prot.gcg8	0.2 KB
prot.ig	0.2 KB
prot.m-acedb	0.3 KB
prot.m-codata	1.2 KB
prot.m-fasta	0.4 KB
prot.m-nbrf	0.5 KB
prot.m-ncbi	0.4 KB
prot.m-swiss	0.8 KB
prot.nbrf	0.1 KB
prot.ncbi	0.2 KB
prot.swiss	0.3 KB
prot.text	0.1 KB
protgap.fasta	0.2 KB
proto	1.4 KB
pTYB1.seq	0.2 KB
range1.list	0.0 KB
range12.list	0.0 KB
range2.list	0.0 KB
site.dat	7.3 KB
swnew	4.5 KB
swnew.phr	0.9 KB
swnew.pin	0.1 KB
swnew.psq	3.6 KB
swsplit	4.5 KB
swsplit.00.phr	0.3 KB
swsplit.00.pin	0.1 KB
swsplit.00.psq	0.6 KB
swsplit.01.phr	0.2 KB
swsplit.01.pin	0.1 KB
swsplit.01.psq	0.9 KB
swsplit.02.phr	0.1 KB
swsplit.02.pin	0.1 KB
swsplit.02.psq	0.5 KB
swsplit.03.phr	0.1 KB
swsplit.03.pin	0.1 KB
swsplit.03.psq	1.2 KB
swsplit.04.phr	0.2 KB
swsplit.04.pin	0.1 KB
swsplit.04.psq	0.3 KB
swsplit.pal	0.2 KB
test.alignsig	12.9 KB
test.findkm	0.1 KB
test.hits	0.5 KB
test.mowse	0.1 KB
test.selex	0.6 KB
test1.jackknifer	0.3 KB
test1.mega	0.2 KB
test1.treecon	0.3 KB
test2.jackknifer	0.4 KB
test2.mega	0.3 KB
test2.treecon	0.3 KB
test3.mega	0.2 KB
test3.treecon	0.3 KB
test4.mega	0.3 KB
testids.fasta	1.2 KB
testids.ncbi	1.0 KB
testseqs.ncbi	6.8 KB
tranalign.pep	0.8 KB
tranalign.seq	2.7 KB
ugly.list	0.0 KB
uglyall.list	0.1 KB
uglyfirst.list	0.0 KB
uglylast.list	0.0 KB
vecseqs.list	0.1 KB
vectors	0.2 KB
withrefm	21.9 KB
wormpep.clone.AB	27.1 KB
wormpep.clone.ZK637	7.3 KB
z83307.seq	23.0 KB
/test/embl/
acnum.hit	0.7 KB
acnum.trg	1.6 KB
des.hit	1.9 KB
des.trg	6.1 KB
division.lkp	0.5 KB
eem_ba1.ref	374.2 KB
eem_ba1.seq	409.2 KB
eem_est.ref	3.5 KB
eem_est.seq	0.6 KB
eem_fun.ref	1.7 KB
eem_fun.seq	0.3 KB
eem_htginv1.ref	11.1 KB
eem_htginv1.seq	1.4 MB
eem_hum1.ref	112.4 KB
eem_hum1.seq	99.2 KB
eem_in.ref	22.7 KB
eem_in.seq	10.8 KB
eem_ov.ref	4.7 KB
eem_ov.seq	1.8 KB
eem_ro.ref	5.5 KB
eem_ro.seq	1.4 KB
eem_vi.ref	1.5 KB
eem_vi.seq	0.4 KB
entrynam.idx	1.1 KB
est.dat	4.2 KB
fun.dat	2.5 KB
hum1.dat	801.4 KB
inv.dat	96.8 KB
keyword.hit	0.7 KB
keyword.trg	4.5 KB
Makefile	11.7 KB
Makefile.am	0.3 KB
Makefile.in	11.3 KB
pln.dat	13.3 KB
pro.dat	66.3 KB
rod.dat	9.9 KB
seqvn.hit	0.8 KB
seqvn.trg	1.9 KB
sts.dat	2.2 KB
taxon.hit	2.4 KB
taxon.trg	4.4 KB
vrl.dat	3.3 KB
vrt.dat	23.5 KB
/test/swiss/
acnum.hit	0.7 KB
acnum.trg	1.8 KB
des.hit	1.8 KB
des.trg	4.6 KB
division.lkp	0.3 KB
entrynam.idx	2.0 KB
keyword.hit	1.9 KB
keyword.trg	3.6 KB
Makefile	11.6 KB
Makefile.am	0.2 KB
Makefile.in	11.2 KB
seq.dat	406.8 KB
seqvn.hit	0.6 KB
seqvn.trg	1.7 KB
taxon.hit	4.0 KB
taxon.trg	8.9 KB
/
aaindexextract.exe	23.6 KB
abiview.exe	45.1 KB
acdc.exe	22.5 KB
acdlog.exe	22.5 KB
acdpretty.exe	22.5 KB
acdtable.exe	22.5 KB
acdtrace.exe	22.5 KB
acdvalid.exe	22.5 KB
ajax.dll	913.4 KB
antigenic.exe	49.2 KB
backtranseq.exe	23.0 KB
banana.exe	49.2 KB
biosed.exe	24.6 KB
btwisted.exe	31.2 KB
cai.exe	41.0 KB
chaos.exe	45.1 KB
charge.exe	41.0 KB
checktrans.exe	41.0 KB
chips.exe	41.0 KB
cirdna.exe	61.4 KB
codcmp.exe	41.0 KB
coderet.exe	24.1 KB
compseq.exe	45.1 KB
cons.exe	41.0 KB
COPYING.txt	18.3 KB
Copyright-primer3.txt	2.4 KB
cpgplot.exe	45.1 KB
cpgreport.exe	41.0 KB
cusp.exe	23.6 KB
cutgextract.exe	36.9 KB
cutseq.exe	23.0 KB
dan.exe	45.1 KB
dbiblast.exe	45.1 KB
dbifasta.exe	36.9 KB
dbiflat.exe	45.1 KB
dbigcg.exe	45.1 KB
degapseq.exe	23.0 KB
descseq.exe	23.0 KB
diffseq.exe	45.1 KB
digest.exe	49.2 KB
distmat.exe	77.8 KB
dotmatcher.exe	49.2 KB
dotpath.exe	45.1 KB
dottup.exe	49.2 KB
dreg.exe	24.1 KB
einverted.exe	36.9 KB
emboss.ini	2.4 KB
embossdata.exe	41.0 KB
embossversion.exe	25.1 KB
emowse.exe	53.2 KB
entret.exe	23.0 KB
epestfind.exe	45.1 KB
eprimer3.exe	65.5 KB
equicktandem.exe	41.0 KB
est2genome.exe	41.0 KB
etandem.exe	41.0 KB
extractfeat.exe	45.1 KB
extractseq.exe	24.1 KB
findkm.exe	49.2 KB
freak.exe	41.0 KB
fuzznuc.exe	41.0 KB
fuzzpro.exe	41.0 KB
fuzztran.exe	45.1 KB
garnier.exe	57.3 KB
geecee.exe	41.0 KB
getorf.exe	27.1 KB
giep.exe	41.0 KB
helixturnhelix.exe	49.2 KB
hmoment.exe	41.0 KB
iep.exe	41.0 KB
infoalign.exe	45.1 KB
infoseq.exe	41.0 KB
isochore.exe	41.0 KB
jembossctl.exe	22.0 KB
kmrsplitter.exe	36.9 KB
kmrunion.exe	41.0 KB
lindna.exe	61.4 KB
listor.exe	24.6 KB
marscan.exe	45.1 KB
maskfeat.exe	24.1 KB
maskseq.exe	23.6 KB
matcher.exe	53.2 KB
megamerger.exe	36.9 KB
merger.exe	45.1 KB
msbar.exe	41.0 KB
mwcontam.exe	49.2 KB
mwfilter.exe	41.0 KB
needle.exe	41.0 KB
newcoils.exe	69.6 KB
newcpgreport.exe	41.0 KB
newcpgseek.exe	30.7 KB
newseq.exe	23.0 KB
noreturn.exe	23.6 KB
notseq.exe	24.1 KB
nthseq.exe	23.0 KB
nucleus.dll	221.2 KB
octanol.exe	41.0 KB
oddcomp.exe	36.9 KB
palindrome.exe	36.9 KB
pasteseq.exe	23.6 KB
patmatdb.exe	30.7 KB
patmatmotifs.exe	41.0 KB
pepcoil.exe	49.2 KB
pepinfo.exe	41.0 KB
pepnet.exe	41.0 KB
pepstats.exe	41.0 KB
pepwheel.exe	41.0 KB
pepwindow.exe	41.0 KB
pepwindowall.exe	41.0 KB
plotcon.exe	41.0 KB
plotorf.exe	41.0 KB
plstnd5.fnt	6.4 KB
plxtnd5.fnt	58.8 KB
polydot.exe	49.2 KB
preg.exe	24.1 KB
prettyplot.exe	61.4 KB
prettyseq.exe	36.9 KB
primer3_core.exe	131.1 KB
primersearch.exe	27.6 KB
printsextract.exe	49.2 KB
profit.exe	49.2 KB
prophecy.exe	45.1 KB
prophet.exe	49.2 KB
prosextract.exe	36.9 KB
pscan.exe	36.9 KB
psiphi.exe	41.0 KB
README.txt	0.5 KB
rebaseextract.exe	45.1 KB
recoder.exe	36.9 KB
redata.exe	45.1 KB
remap.exe	35.3 KB
restover.exe	36.9 KB
restrict.exe	41.0 KB
revseq.exe	23.6 KB
seealso.exe	23.6 KB
seqmatchall.exe	24.1 KB
seqret.exe	23.0 KB
seqretsplit.exe	24.1 KB
seqrettype.exe	23.0 KB
showalign.exe	45.1 KB
showdb.exe	36.9 KB
showfeat.exe	45.1 KB
showorf.exe	45.1 KB
showseq.exe	45.1 KB
shuffleseq.exe	23.0 KB
sigcleave.exe	49.2 KB
silent.exe	36.9 KB
sirna.exe	45.1 KB
sixpack.exe	36.9 KB
skipseq.exe	23.0 KB
sort.exe	49.2 KB
splitter.exe	24.1 KB
stretcher.exe	45.1 KB
stssearch.exe	36.9 KB
supermatcher.exe	41.0 KB
syco.exe	41.0 KB
tcode.exe	45.1 KB
textsearch.exe	24.6 KB
tfextract.exe	24.6 KB
tfscan.exe	36.9 KB
tmap.exe	49.2 KB
tranalign.exe	36.9 KB
transeq.exe	24.1 KB
trimest.exe	24.6 KB
trimseq.exe	41.0 KB
twofeat.exe	45.1 KB
unins000.dat	133.5 KB
unins000.exe	641.0 KB
Uninst.dll	49.2 KB
union.exe	23.0 KB
vectorstrip.exe	36.9 KB
water.exe	41.0 KB
whichdb.exe	24.1 KB
wobble.exe	41.0 KB
wordcount.exe	23.0 KB
wordmatch.exe	23.6 KB
wossname.exe	23.6 KB
yank.exe	22.5 KB
Total files 1341